Education
- 2015 PhD physics, New York University, New York, NY, USA
- 2009 BA physics, Rutgers University, New Brunswick, NJ, USA
Experience
Vice President of Research and Development
Spheryx, Inc.
2017- present
- Leadership team role
◦ Bring expertise with Spheryx’s foundational technology
including holographic video microscopy to company strategy
discussion
◦ Supervise and mentor direct reports - R&D team leader
◦ Implemented effective Kanban style planning process
◦ Maintain new product roadmap
◦ Formed the company’s scientific advisory board - R&D team member
◦ Identified and helped resolve sources of aberration in our
optical system
◦ Developed sample loading robot
◦ Improved how we scientifically validate our analysis - SW team member
◦ Trained machine learning object detection model to increase
recall from 72% to 92% on challenging test data
◦ Developed compliant version of our software satisfying 21 CFR
p11 requirements
◦ Created interface for controlling and training sample loading
robot - Commercial
◦ Iteratively improve Spheryx particle characterization
instruments leading to sales at top pharmaceutical companies
and academic laboratories
◦ Troubleshoot and solve difficult customer issues
◦ Capture and address feedback from customers - Infrastructure
◦ Setup and administer software services used by organization
◦ Purchase, configure, and troubleshoot on premise computers,
servers, and networking equipment
Director of Analytical Services
Spheryx, Inc.
2015-2017
- First employee after company founding
- Developed commercial holographic particle characterization
instrument - Sped up academic data analysis code by 180x
- Contributed to successful SBIR grant applications to NSF and NIH
Selected Publications
- T. Marcus, J. Lumer, R. Stasavage, D. B. Ruffner, L. A. Philips, F. C. Cheong, “Monitoring polysorbate 80 degradation in protein solutions using Total Holographic Characterization”, International Journal of Pharmaceutics 652, 123843 (2024).
- R. E. Cavicchi, L. A. Philips, F. C. Cheong, D. B. Ruffner, P. Kasimbeg, W. Vreeland, “Distribution of average aggregate density from stir-stressed NIST mAb protein”, Journal of Pharmaceutical Sciences 111, 1614 (2022).
- D. B. Ruffner, F. C. Cheong, J. M. Blusewicz, L. A. Philips, “Lifting degeneracy in holographic characterization of colloidal particles using multi-color imaging”, Optics Express 26, 13239 (2018).
- D. B. Ruffner and D. G. Grier, “Optical conveyors: A class of active tractor beams”, Phys. Rev. Lett. 109, 163903 (2012).
- D. B. Ruffner and D. G. Grier, “Optical Forces and Torques in Non-uniform Beams of Light”, Phys. Rev. Lett. 108, 173602 (2012).
Honors and Recognition
- 2014 The NYU Graduate School of Arts and Science Dean’s dissertation
fellowship - 2012 Article on NewScientist.com: “Tractor beam built from rings of laser light”
Professional Affiliations
- 2009 – present Member: American Physical Society
- 2011-2012 Organizer: New York Academy of Science’s Gotham-Metro Condensed
Matter Conference
Skills
- Programming: Python, git/jj, SQL, scheme, Elixir, HTML/CSS/JS, CUDA, C
- IT: bash, PowerShell, Ansible, Google Workspace admin, Linux
- Data science/machine learning: Pandas, PyTorch, Tensorflow/Keras, OpenCV,
Scipy, DVC, scikit-learn - Data visualization: matplotlib, Dash, Plotly
- Social/organizational: Agile methods/Scrum/Kanban, Non-Violent
Communication, meeting facilitation, sociocracy
Other Activities
- 2025 – present Member of Peer Support across Practices sociocracy community
- 2025 Coach for Rutherford 1st-2nd grade recreational soccer team
- 2015-2025 Run with NJ Road Runners
- 2019 STEMU mentoring program
- 2015 – 2018 Civic hacking with Code for Newark